BioChatter is an open source Python package released on June 6, 2025, aimed at integrating conversational AI into biomedical research workflows.
The package provides a backend interface for connecting large language models with biological knowledge graphs and common biomedical tasks using a unified API.
Users can install the package via pip and interact with models by sending prompts and receiving structured outputs.
BioChatter supports integration with BioCypher, evaluation metrics, and model agnostic chaining to compare different large language models.
The library simplifies the development of applications like gene disease extractors and dialog agents for molecular data by automating various components.
It facilitates reproducible benchmarks in biomedical NLP and provides researchers with an easier way to prototype and evaluate conversational AI pipelines.
Interested individuals can explore the documentation on the GitHub repository, experiment with custom prompts, and contribute to the community.
BioChatter enables the integration of large language models into scientific workflows, paving the way for more conversational and data-driven tools in biology.