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Celler:A Genomic Language Model for Long-Tailed Single-Cell Annotation

  • Recent breakthroughs in single-cell technology have led to the need for efficient annotation of long-tailed single-cell data pertaining to disease conditions.
  • To address this challenge, Celler, a generative pre-training model, has been introduced that incorporates the Gaussian Inflation (GInf) Loss function and Hard Data Mining (HDM) strategy.
  • The GInf Loss function dynamically adjusts sample weights, improving the model's ability to learn from rare categories and reducing the risk of overfitting for common categories.
  • The HDM strategy targets difficult-to-learn minority data samples, significantly improving the model's predictive accuracy.

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