Inferencing Gene Regulatory Networks (GRNs) from gene expression data is a pivotal challenge in systems biology.Most studies have not considered the skewed degree distribution of genes, which complicates the application of directed graph embedding methods.To address this issue, the Cross-Attention Complex Dual Graph Embedding Model (XATGRN) is proposed.XATGRN effectively captures intricate gene interactions and accurately predicts regulatory relationships and their directionality.