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Arxiv

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Image Credit: Arxiv

In-Context Learning can distort the relationship between sequence likelihoods and biological fitness

  • Language models have emerged as powerful predictors of the viability of biological sequences.
  • In-context learning can distort the relationship between fitness and likelihood scores of sequences.
  • This distortion is prominently seen in sequences containing repeated motifs.
  • The phenomenon affects transformer-based models and is mediated by a look-up operation.

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