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Image Credit: Arxiv

Sample, estimate, aggregate: A recipe for causal discovery foundation models

  • Causal discovery, the task of inferring causal structure from data, has the potential to uncover mechanistic insights from biological experiments.
  • To address challenges in causal discovery with larger sets of variables and limited data, a foundation model-inspired approach is proposed.
  • The approach involves training a supervised model on large-scale, synthetic data to predict causal graphs from summary statistics.
  • Experiments show that the model generalizes well, runs on graphs with hundreds of variables in seconds, and is adaptable to different data assumptions.

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